CDS

Accession Number TCMCG006C53916
gbkey CDS
Protein Id XP_013727005.1
Location complement(join(45025413..45025487,45025604..45025756,45025865..45025918,45026006..45026113,45026185..45026301,45026374..45026549,45026728..45026803,45026891..45027002,45027103..45027232,45027326..45027545))
Gene LOC106430755
GeneID 106430755
Organism Brassica napus

Protein

Length 406aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA293435
db_source XM_013871551.2
Definition 3-isopropylmalate dehydrogenase, chloroplastic-like [Brassica napus]

EGGNOG-MAPPER Annotation

COG_category E
Description Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate
KEGG_TC -
KEGG_Module M00432        [VIEW IN KEGG]
M00535        [VIEW IN KEGG]
KEGG_Reaction R00994        [VIEW IN KEGG]
R04426        [VIEW IN KEGG]
R10052        [VIEW IN KEGG]
KEGG_rclass RC00084        [VIEW IN KEGG]
RC00417        [VIEW IN KEGG]
RC03036        [VIEW IN KEGG]
BRITE br01601        [VIEW IN KEGG]
ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
KEGG_ko ko:K00052        [VIEW IN KEGG]
EC 1.1.1.85        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00290        [VIEW IN KEGG]
ko00660        [VIEW IN KEGG]
ko01100        [VIEW IN KEGG]
ko01110        [VIEW IN KEGG]
ko01210        [VIEW IN KEGG]
ko01230        [VIEW IN KEGG]
map00290        [VIEW IN KEGG]
map00660        [VIEW IN KEGG]
map01100        [VIEW IN KEGG]
map01110        [VIEW IN KEGG]
map01210        [VIEW IN KEGG]
map01230        [VIEW IN KEGG]
GOs GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0009507        [VIEW IN EMBL-EBI]
GO:0009526        [VIEW IN EMBL-EBI]
GO:0009532        [VIEW IN EMBL-EBI]
GO:0009536        [VIEW IN EMBL-EBI]
GO:0009570        [VIEW IN EMBL-EBI]
GO:0009941        [VIEW IN EMBL-EBI]
GO:0031967        [VIEW IN EMBL-EBI]
GO:0031975        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044434        [VIEW IN EMBL-EBI]
GO:0044435        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCGGCGGCTCTGCAGGCGAATATCCGACCGGTCAAGTTTCCGGCTACGTTAAGAGCTCTAACCAAACAATCGCCGGCACCCTTTAGAGTAAGATGCTGCGCTGTTAATTCCGCTGGGAAAAAGCGATACAACATCACTCTCCTTCCCGGAGACGGCATCGGTCCGGAGGTTATCTCCATCGCTAAAAATGTGCTTCAGCAAGCTGGATCCTTGGAAGGAGTGGAGTTTAGCTTTAGGGAGATGCCTGTAGGAGGAGCTGCTTTGGATTTGGTTGGAGTGCCTTTGCCTGAGGACACCATCTCCGCTGCTAAAGATTCAGATGCTGTGCTTCTTGGAGCCATCGGAGGGTACAAATGGGATAAGAATGAAAAACATCTGAAGCCTGAGACTGGTTTACTTCAACTTCGGGCCGCTCTTAAAGTCTTTGCTAATCTCAGACCTGCTACTGTTCTTCCACAGTTAGTTGATGCCTCGACCTTGAAAAAAGAGGTTGCTGAAGGTGTTGATCTAATGGTTGTAAGGGAGCTTACTGGAGGTATATACTTTGGAGAGCCAAGGGGCATTAAGACTAATGAAAATGGTGAGGAAGTTGGGTTTAATACCGAGGTCTATGCTGCTCACGAGATTGATAGAATTGCTCGTGTTGCCTTCGAGACTGCTCGTAAGCGACGTGGCAAGTTGTGTTCTGTCGACAAAGCTAATGTCTTGGATGCCTCGATTTTATGGAGGAGGCGAGTAACAGCATTAGCCGCTGAATATCCTGATGTTGAACTGTCACATATGTACGTCGACAATGCTGCCATGCAGCTTGTTCGTGACCCTAAACAGTTTGACACCATTGTCACAAACAACATTTTTGGTGATATATTATCCGATGAAGCTTCAATGATCACAGGGAGCATCGGCATGCTTCCTTCTGCTAGTCTCAGTGACTCGGGACCTGGACTCTTTGAACCAATACATGGTTCTGCACCTGATATTGCTGGACAGGATAAAGCAAACCCGTTAGCAACCATCCTCAGCGCTGCAATGCTTCTGAAATACGGACTTGGAGAAGAAAAGGCAGCTAAGAGGATCGAAGACGTGGTGTTGGGTGCTCTGAACAAAGGGTTTAGAACAGGAGACATCTACTCCAATGGAACCAAACTGGTGGGGTGCAAGGAGATGGGAGAGGAGGTTCTGAAGTCAGTGGACTCCCAAGTTCATGCTTCTGTTTAG
Protein:  
MAAALQANIRPVKFPATLRALTKQSPAPFRVRCCAVNSAGKKRYNITLLPGDGIGPEVISIAKNVLQQAGSLEGVEFSFREMPVGGAALDLVGVPLPEDTISAAKDSDAVLLGAIGGYKWDKNEKHLKPETGLLQLRAALKVFANLRPATVLPQLVDASTLKKEVAEGVDLMVVRELTGGIYFGEPRGIKTNENGEEVGFNTEVYAAHEIDRIARVAFETARKRRGKLCSVDKANVLDASILWRRRVTALAAEYPDVELSHMYVDNAAMQLVRDPKQFDTIVTNNIFGDILSDEASMITGSIGMLPSASLSDSGPGLFEPIHGSAPDIAGQDKANPLATILSAAMLLKYGLGEEKAAKRIEDVVLGALNKGFRTGDIYSNGTKLVGCKEMGEEVLKSVDSQVHASV